Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 AC134684.3-201ENST00000641758 218 ntBASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18■□□□□ 0.47
CCDC163A0A0D9SF12 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CCDC163A0A0D9SF12 MYLKP1-201ENST00000509077 1580 ntBASIC18■□□□□ 0.47
CCDC163A0A0D9SF12 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC163A0A0D9SF12 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18■□□□□ 0.47
CCDC163A0A0D9SF12 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC163A0A0D9SF12 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18■□□□□ 0.47
CCDC163A0A0D9SF12 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18■□□□□ 0.47
CCDC163A0A0D9SF12 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC163A0A0D9SF12 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CCDC163A0A0D9SF12 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18■□□□□ 0.47
CCDC163A0A0D9SF12 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18■□□□□ 0.47
CCDC163A0A0D9SF12 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18■□□□□ 0.47
CCDC163A0A0D9SF12 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18■□□□□ 0.47
CCDC163A0A0D9SF12 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18■□□□□ 0.47
CCDC163A0A0D9SF12 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
CCDC163A0A0D9SF12 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC163A0A0D9SF12 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC163A0A0D9SF12 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC163A0A0D9SF12 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CCDC163A0A0D9SF12 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 RPS8P6-201ENST00000426177 609 ntBASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CCDC163A0A0D9SF12 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 AC097374.2-201ENST00000618617 1306 ntBASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 AC009947.1-201ENST00000444350 727 ntBASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 AP006288.1-201ENST00000446065 395 ntBASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 LINC02084-201ENST00000606069 1096 ntBASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 LINC00602-201ENST00000629776 2065 ntBASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC163A0A0D9SF12 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms