Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
GPC6Q9Y625 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.33■□□□□ 0.36
GPC6Q9Y625 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.33■□□□□ 0.36
GPC6Q9Y625 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.33■□□□□ 0.36
GPC6Q9Y625 AP000692.2-201ENST00000608391 879 ntBASIC17.33■□□□□ 0.36
GPC6Q9Y625 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC6Q9Y625 AL513477.1-201ENST00000602865 2407 ntBASIC17.33■□□□□ 0.36
GPC6Q9Y625 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC6Q9Y625 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC6Q9Y625 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GPC6Q9Y625 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC6Q9Y625 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.33■□□□□ 0.36
GPC6Q9Y625 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC6Q9Y625 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC6Q9Y625 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
GPC6Q9Y625 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
GPC6Q9Y625 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC6Q9Y625 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
GPC6Q9Y625 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
GPC6Q9Y625 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC6Q9Y625 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC6Q9Y625 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
GPC6Q9Y625 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.32■□□□□ 0.36
GPC6Q9Y625 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC6Q9Y625 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.32■□□□□ 0.36
GPC6Q9Y625 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.32■□□□□ 0.36
GPC6Q9Y625 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC6Q9Y625 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC6Q9Y625 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
GPC6Q9Y625 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC6Q9Y625 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
GPC6Q9Y625 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC6Q9Y625 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.32■□□□□ 0.36
GPC6Q9Y625 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.32■□□□□ 0.36
GPC6Q9Y625 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC6Q9Y625 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.32■□□□□ 0.36
GPC6Q9Y625 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC6Q9Y625 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
GPC6Q9Y625 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC6Q9Y625 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC6Q9Y625 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC6Q9Y625 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC6Q9Y625 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.32■□□□□ 0.36
GPC6Q9Y625 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC6Q9Y625 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC6Q9Y625 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC6Q9Y625 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.32■□□□□ 0.36
GPC6Q9Y625 AC084018.2-201ENST00000613093 2607 ntBASIC17.32■□□□□ 0.36
GPC6Q9Y625 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC6Q9Y625 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
GPC6Q9Y625 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.31■□□□□ 0.36
GPC6Q9Y625 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
GPC6Q9Y625 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC6Q9Y625 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC6Q9Y625 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.31■□□□□ 0.36
GPC6Q9Y625 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC6Q9Y625 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GPC6Q9Y625 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC6Q9Y625 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
GPC6Q9Y625 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC6Q9Y625 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
GPC6Q9Y625 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GPC6Q9Y625 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.31■□□□□ 0.36
GPC6Q9Y625 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC6Q9Y625 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.31■□□□□ 0.36
GPC6Q9Y625 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
GPC6Q9Y625 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GPC6Q9Y625 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.31■□□□□ 0.36
GPC6Q9Y625 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
GPC6Q9Y625 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.31■□□□□ 0.36
GPC6Q9Y625 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC6Q9Y625 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC6Q9Y625 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC6Q9Y625 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC6Q9Y625 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC6Q9Y625 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC6Q9Y625 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.31■□□□□ 0.36
GPC6Q9Y625 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GPC6Q9Y625 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GPC6Q9Y625 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
GPC6Q9Y625 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.31■□□□□ 0.36
GPC6Q9Y625 MST1L-201ENST00000442552 2185 ntBASIC17.3■□□□□ 0.36
GPC6Q9Y625 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC6Q9Y625 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC6Q9Y625 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GPC6Q9Y625 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC6Q9Y625 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC6Q9Y625 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC6Q9Y625 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GPC6Q9Y625 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC6Q9Y625 UNC93B2-201ENST00000285383 730 ntBASIC17.3■□□□□ 0.36
GPC6Q9Y625 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
GPC6Q9Y625 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.3■□□□□ 0.36
GPC6Q9Y625 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GPC6Q9Y625 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
GPC6Q9Y625 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.3■□□□□ 0.36
GPC6Q9Y625 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.3■□□□□ 0.36
GPC6Q9Y625 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC6Q9Y625 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.3■□□□□ 0.36
GPC6Q9Y625 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms