Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 AC008894.3-201ENST00000624324 3103 ntBASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 KRT18P38-201ENST00000449496 1282 ntBASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 VENTXP5-201ENST00000523979 775 ntBASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 AL691432.3-201ENST00000621860 400 ntBASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA4Q9Y5G9 AC009053.2-201ENST00000563701 2365 ntBASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 AP003041.3-201ENST00000527151 707 ntBASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms