Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 AC011498.5-201ENST00000592027 486 ntBASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 AL121672.3-201ENST00000608644 468 ntBASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 AC112497.1-201ENST00000624824 639 ntBASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 LTB4R2-202ENST00000528054 3092 ntBASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 AC068880.1-201ENST00000507289 2297 ntBASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA6Q9Y5G7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 HLA-F-220ENST00000434407 884 ntBASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA6Q9Y5G7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 KRT8P7-201ENST00000533003 1432 ntBASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 AC026396.1-201ENST00000419388 421 ntBASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 TSSC2-201ENST00000450217 709 ntBASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 BX276092.5-203ENST00000456199 560 ntBASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 AC092329.2-201ENST00000598402 547 ntBASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 AC092119.3-201ENST00000612618 583 ntBASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms