Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 AC148477.8-201ENST00000624298 468 ntBASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 AC005332.7-201ENST00000614046 2005 ntBASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB7Q9Y5E2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 MTDHP3-201ENST00000594186 672 ntBASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 AL355877.3-201ENST00000622820 899 ntBASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 LINC00602-201ENST00000629776 2065 ntBASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHB7Q9Y5E2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 PMS2P1-201ENST00000431037 1228 ntBASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 RNPS1P1-201ENST00000507437 918 ntBASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 AC073648.2-201ENST00000510116 352 ntBASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 AL671883.3-201ENST00000603274 991 ntBASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 AC117500.6-201ENST00000624871 588 ntBASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB7Q9Y5E2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 MIR574-201ENST00000385209 96 ntBASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 RBM17P3-201ENST00000417687 1192 ntBASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB7Q9Y5E2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms