Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.37■□□□□ 0.53
PKP3Q9Y446 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.37■□□□□ 0.53
PKP3Q9Y446 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
PKP3Q9Y446 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.37■□□□□ 0.53
PKP3Q9Y446 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PKP3Q9Y446 AC006011.2-201ENST00000621313 1158 ntBASIC18.37■□□□□ 0.53
PKP3Q9Y446 AL157888.1-201ENST00000631930 593 ntBASIC18.37■□□□□ 0.53
PKP3Q9Y446 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PKP3Q9Y446 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PKP3Q9Y446 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PKP3Q9Y446 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.37■□□□□ 0.53
PKP3Q9Y446 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.37■□□□□ 0.53
PKP3Q9Y446 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PKP3Q9Y446 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PKP3Q9Y446 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PKP3Q9Y446 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PKP3Q9Y446 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PKP3Q9Y446 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PKP3Q9Y446 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PKP3Q9Y446 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PKP3Q9Y446 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PKP3Q9Y446 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
PKP3Q9Y446 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PKP3Q9Y446 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PKP3Q9Y446 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
PKP3Q9Y446 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PKP3Q9Y446 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PKP3Q9Y446 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PKP3Q9Y446 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PKP3Q9Y446 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PKP3Q9Y446 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PKP3Q9Y446 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PKP3Q9Y446 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PKP3Q9Y446 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PKP3Q9Y446 AC092647.4-201ENST00000457211 535 ntBASIC18.36■□□□□ 0.53
PKP3Q9Y446 RASA4DP-201ENST00000460726 1199 ntBASIC18.36■□□□□ 0.53
PKP3Q9Y446 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.36■□□□□ 0.53
PKP3Q9Y446 KRT18P21-201ENST00000515767 1272 ntBASIC18.36■□□□□ 0.53
PKP3Q9Y446 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.36■□□□□ 0.53
PKP3Q9Y446 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.36■□□□□ 0.53
PKP3Q9Y446 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PKP3Q9Y446 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PKP3Q9Y446 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PKP3Q9Y446 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
PKP3Q9Y446 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PKP3Q9Y446 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
PKP3Q9Y446 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.35■□□□□ 0.53
PKP3Q9Y446 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.35■□□□□ 0.53
PKP3Q9Y446 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PKP3Q9Y446 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PKP3Q9Y446 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.35■□□□□ 0.53
PKP3Q9Y446 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PKP3Q9Y446 AL162741.1-201ENST00000565563 1558 ntBASIC18.35■□□□□ 0.53
PKP3Q9Y446 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PKP3Q9Y446 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PKP3Q9Y446 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PKP3Q9Y446 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PKP3Q9Y446 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
PKP3Q9Y446 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PKP3Q9Y446 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PKP3Q9Y446 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PKP3Q9Y446 STARP1-201ENST00000397973 869 ntBASIC18.35■□□□□ 0.53
PKP3Q9Y446 HOMER2P1-201ENST00000455653 964 ntBASIC18.35■□□□□ 0.53
PKP3Q9Y446 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PKP3Q9Y446 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PKP3Q9Y446 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.35■□□□□ 0.53
PKP3Q9Y446 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.35■□□□□ 0.53
PKP3Q9Y446 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PKP3Q9Y446 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.35■□□□□ 0.53
PKP3Q9Y446 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PKP3Q9Y446 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.35■□□□□ 0.53
PKP3Q9Y446 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PKP3Q9Y446 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PKP3Q9Y446 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PKP3Q9Y446 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PKP3Q9Y446 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PKP3Q9Y446 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PKP3Q9Y446 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PKP3Q9Y446 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.34■□□□□ 0.53
PKP3Q9Y446 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PKP3Q9Y446 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PKP3Q9Y446 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PKP3Q9Y446 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PKP3Q9Y446 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PKP3Q9Y446 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PKP3Q9Y446 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
PKP3Q9Y446 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PKP3Q9Y446 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PKP3Q9Y446 AC104076.2-201ENST00000448912 469 ntBASIC18.34■□□□□ 0.53
PKP3Q9Y446 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.34■□□□□ 0.53
PKP3Q9Y446 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.34■□□□□ 0.53
PKP3Q9Y446 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.34■□□□□ 0.53
PKP3Q9Y446 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.34■□□□□ 0.53
PKP3Q9Y446 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.34■□□□□ 0.53
PKP3Q9Y446 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.34■□□□□ 0.53
PKP3Q9Y446 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PKP3Q9Y446 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PKP3Q9Y446 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.34■□□□□ 0.53
PKP3Q9Y446 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
PKP3Q9Y446 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms