Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AL023806.1-201ENST00000603994 1649 ntBASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 AF201337.1-201ENST00000520239 748 ntBASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 AL121832.2-201ENST00000610979 668 ntBASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 MIR6821-201ENST00000617625 74 ntBASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 AC092368.3-202ENST00000574180 1591 ntBASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 AC006116.8-202ENST00000587620 1550 ntBASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 AC022211.2-201ENST00000585075 2527 ntBASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 POU5F1P3-201ENST00000428824 1078 ntBASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 KRT8P3-201ENST00000519669 1449 ntBASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 C1QL1P1-201ENST00000568105 661 ntBASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 AC120498.8-201ENST00000614275 531 ntBASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RCL1Q9Y2P8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.96□□□□□ -0.02
RCL1Q9Y2P8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RCL1Q9Y2P8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
RCL1Q9Y2P8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.96□□□□□ -0.02
RCL1Q9Y2P8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.96□□□□□ -0.02
RCL1Q9Y2P8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 NKILA-202ENST00000614771 2598 ntBASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 AC004911.1-201ENST00000416316 871 ntBASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 AL050303.2-201ENST00000619798 666 ntBASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 AC018695.7-201ENST00000624587 2492 ntBASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RCL1Q9Y2P8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.94□□□□□ -0.02
RCL1Q9Y2P8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RCL1Q9Y2P8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms