Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 KRT18P48-201ENST00000434763 852 ntBASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 AL671277.2-201ENST00000458060 996 ntBASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPH3AQ9Y2J0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPH3AQ9Y2J0 KRT8P50-201ENST00000562022 1438 ntBASIC16.77■□□□□ 0.27
RPH3AQ9Y2J0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPH3AQ9Y2J0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.77■□□□□ 0.27
RPH3AQ9Y2J0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.77■□□□□ 0.27
RPH3AQ9Y2J0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPH3AQ9Y2J0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.77■□□□□ 0.27
RPH3AQ9Y2J0 AC011270.2-201ENST00000624293 2550 ntBASIC16.77■□□□□ 0.27
RPH3AQ9Y2J0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPH3AQ9Y2J0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 AC092597.1-201ENST00000487352 616 ntBASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 MIR3917-201ENST00000580971 93 ntBASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPH3AQ9Y2J0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPH3AQ9Y2J0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms