Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 GCSHP2-201ENST00000560971 527 ntBASIC15.8■□□□□ 0.12
TREM2Q9NZC2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 AL358472.4-201ENST00000633140 710 ntBASIC15.8■□□□□ 0.12
TREM2Q9NZC2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 AC073592.3-201ENST00000625118 1834 ntBASIC15.8■□□□□ 0.12
TREM2Q9NZC2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREM2Q9NZC2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 AC135050.7-201ENST00000624508 2218 ntBASIC15.79■□□□□ 0.12
TREM2Q9NZC2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 AL031133.1-201ENST00000406807 723 ntBASIC15.79■□□□□ 0.12
TREM2Q9NZC2 HOMER2P1-201ENST00000455653 964 ntBASIC15.79■□□□□ 0.12
TREM2Q9NZC2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TREM2Q9NZC2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 BCL2-203ENST00000589955 5011 ntBASIC15.78■□□□□ 0.12
TREM2Q9NZC2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 MYC-208ENST00000641036 567 ntBASIC15.78■□□□□ 0.12
TREM2Q9NZC2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TREM2Q9NZC2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms