Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 AC026471.5-201ENST00000615068 467 ntBASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 PP12613-201ENST00000424958 2230 ntBASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 KRT8P41-201ENST00000533985 1514 ntBASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2LQ9NUG4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 MMP23A-201ENST00000234610 1017 ntBASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 HLA-A-209ENST00000638375 975 ntBASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 BCL2-203ENST00000589955 5011 ntBASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2LQ9NUG4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.39■□□□□ 0.38
CCM2LQ9NUG4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCM2LQ9NUG4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.39■□□□□ 0.38
CCM2LQ9NUG4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 AD000864.1-201ENST00000624076 2295 ntBASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms