Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TLR9Q9NR96 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.35■□□□□ 0.69
TLR9Q9NR96 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.35■□□□□ 0.69
TLR9Q9NR96 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TLR9Q9NR96 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TLR9Q9NR96 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.35■□□□□ 0.69
TLR9Q9NR96 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TLR9Q9NR96 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TLR9Q9NR96 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TLR9Q9NR96 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TLR9Q9NR96 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TLR9Q9NR96 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.34■□□□□ 0.69
TLR9Q9NR96 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TLR9Q9NR96 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TLR9Q9NR96 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TLR9Q9NR96 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TLR9Q9NR96 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TLR9Q9NR96 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TLR9Q9NR96 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.34■□□□□ 0.69
TLR9Q9NR96 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.34■□□□□ 0.69
TLR9Q9NR96 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
TLR9Q9NR96 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TLR9Q9NR96 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TLR9Q9NR96 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.34■□□□□ 0.69
TLR9Q9NR96 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.34■□□□□ 0.69
TLR9Q9NR96 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.34■□□□□ 0.69
TLR9Q9NR96 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.34■□□□□ 0.69
TLR9Q9NR96 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.34■□□□□ 0.69
TLR9Q9NR96 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.34■□□□□ 0.69
TLR9Q9NR96 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TLR9Q9NR96 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.34■□□□□ 0.69
TLR9Q9NR96 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
TLR9Q9NR96 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TLR9Q9NR96 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TLR9Q9NR96 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TLR9Q9NR96 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TLR9Q9NR96 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TLR9Q9NR96 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TLR9Q9NR96 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TLR9Q9NR96 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TLR9Q9NR96 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TLR9Q9NR96 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
TLR9Q9NR96 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TLR9Q9NR96 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TLR9Q9NR96 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.33■□□□□ 0.69
TLR9Q9NR96 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.33■□□□□ 0.69
TLR9Q9NR96 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TLR9Q9NR96 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.33■□□□□ 0.68
TLR9Q9NR96 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.33■□□□□ 0.68
TLR9Q9NR96 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.33■□□□□ 0.68
TLR9Q9NR96 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.33■□□□□ 0.68
TLR9Q9NR96 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.33■□□□□ 0.68
TLR9Q9NR96 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.33■□□□□ 0.68
TLR9Q9NR96 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.33■□□□□ 0.68
TLR9Q9NR96 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.33■□□□□ 0.68
TLR9Q9NR96 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.33■□□□□ 0.68
TLR9Q9NR96 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TLR9Q9NR96 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TLR9Q9NR96 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TLR9Q9NR96 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TLR9Q9NR96 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TLR9Q9NR96 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TLR9Q9NR96 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TLR9Q9NR96 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TLR9Q9NR96 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TLR9Q9NR96 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TLR9Q9NR96 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TLR9Q9NR96 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.32■□□□□ 0.68
TLR9Q9NR96 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TLR9Q9NR96 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TLR9Q9NR96 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TLR9Q9NR96 INTS4P1-201ENST00000438455 1935 ntBASIC19.32■□□□□ 0.68
TLR9Q9NR96 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TLR9Q9NR96 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TLR9Q9NR96 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.32■□□□□ 0.68
TLR9Q9NR96 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.32■□□□□ 0.68
TLR9Q9NR96 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TLR9Q9NR96 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.32■□□□□ 0.68
TLR9Q9NR96 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TLR9Q9NR96 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TLR9Q9NR96 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TLR9Q9NR96 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TLR9Q9NR96 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TLR9Q9NR96 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TLR9Q9NR96 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.32■□□□□ 0.68
TLR9Q9NR96 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.32■□□□□ 0.68
TLR9Q9NR96 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TLR9Q9NR96 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TLR9Q9NR96 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.31■□□□□ 0.68
TLR9Q9NR96 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TLR9Q9NR96 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TLR9Q9NR96 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TLR9Q9NR96 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.31■□□□□ 0.68
TLR9Q9NR96 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TLR9Q9NR96 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TLR9Q9NR96 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TLR9Q9NR96 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
TLR9Q9NR96 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.31■□□□□ 0.68
TLR9Q9NR96 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TLR9Q9NR96 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms