Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 AC097488.1-201ENST00000507834 756 ntBASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 NUDT16P1-203ENST00000513809 620 ntBASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 DUTP2-201ENST00000519164 463 ntBASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 MIR4651-201ENST00000582622 73 ntBASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 AL359736.2-201ENST00000621992 437 ntBASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 TSPY20P-201ENST00000450910 630 ntBASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 FAM201B-201ENST00000458407 597 ntBASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 AL023803.3-201ENST00000615559 522 ntBASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 AC132938.6-201ENST00000623828 1655 ntBASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC52A3Q9NQ40 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 KRT18P23-201ENST00000435622 1283 ntBASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 AL023806.1-201ENST00000603994 1649 ntBASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC52A3Q9NQ40 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 WWOX-216ENST00000569818 525 ntBASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 AC100803.2-201ENST00000562459 1963 ntBASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC52A3Q9NQ40 AD000864.1-201ENST00000624076 2295 ntBASIC17.27■□□□□ 0.35
SLC52A3Q9NQ40 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms