Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH20Q9HBT6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CDH20Q9HBT6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16■□□□□ 0.15
CDH20Q9HBT6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16■□□□□ 0.15
CDH20Q9HBT6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CDH20Q9HBT6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
CDH20Q9HBT6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH20Q9HBT6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
CDH20Q9HBT6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDH20Q9HBT6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH20Q9HBT6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16■□□□□ 0.15
CDH20Q9HBT6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH20Q9HBT6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
CDH20Q9HBT6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16■□□□□ 0.15
CDH20Q9HBT6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDH20Q9HBT6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH20Q9HBT6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
CDH20Q9HBT6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH20Q9HBT6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16■□□□□ 0.15
CDH20Q9HBT6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
CDH20Q9HBT6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CDH20Q9HBT6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16■□□□□ 0.15
CDH20Q9HBT6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16■□□□□ 0.15
CDH20Q9HBT6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16■□□□□ 0.15
CDH20Q9HBT6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16■□□□□ 0.15
CDH20Q9HBT6 DUX4L26-201ENST00000489078 1255 ntBASIC16■□□□□ 0.15
CDH20Q9HBT6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDH20Q9HBT6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16■□□□□ 0.15
CDH20Q9HBT6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16■□□□□ 0.15
CDH20Q9HBT6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16■□□□□ 0.15
CDH20Q9HBT6 MIR3917-201ENST00000580971 93 ntBASIC16■□□□□ 0.15
CDH20Q9HBT6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16■□□□□ 0.15
CDH20Q9HBT6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16■□□□□ 0.15
CDH20Q9HBT6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16■□□□□ 0.15
CDH20Q9HBT6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH20Q9HBT6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CDH20Q9HBT6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16■□□□□ 0.15
CDH20Q9HBT6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CDH20Q9HBT6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH20Q9HBT6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH20Q9HBT6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CDH20Q9HBT6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH20Q9HBT6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 AL163051.1-201ENST00000569214 1512 ntBASIC15.99■□□□□ 0.15
CDH20Q9HBT6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 AL138781.2-201ENST00000617896 1843 ntBASIC15.99■□□□□ 0.15
CDH20Q9HBT6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 WIZP1-201ENST00000531444 2299 ntBASIC15.99■□□□□ 0.15
CDH20Q9HBT6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH20Q9HBT6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 AC126763.1-201ENST00000552015 2118 ntBASIC15.98■□□□□ 0.15
CDH20Q9HBT6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 MIR149-201ENST00000384879 89 ntBASIC15.98■□□□□ 0.15
CDH20Q9HBT6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 AL359075.1-203ENST00000462729 1002 ntBASIC15.98■□□□□ 0.15
CDH20Q9HBT6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms