Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC40Q9H9A6 AC005332.8-201ENST00000622750 2735 ntBASIC18.58■□□□□ 0.56
LRRC40Q9H9A6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC40Q9H9A6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC40Q9H9A6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC40Q9H9A6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.58■□□□□ 0.56
LRRC40Q9H9A6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.58■□□□□ 0.56
LRRC40Q9H9A6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
LRRC40Q9H9A6 AC138028.4-201ENST00000564984 1845 ntBASIC18.58■□□□□ 0.56
LRRC40Q9H9A6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC40Q9H9A6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
LRRC40Q9H9A6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.58■□□□□ 0.56
LRRC40Q9H9A6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 AL096828.2-201ENST00000567259 1965 ntBASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 SEC1P-202ENST00000473944 940 ntBASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC40Q9H9A6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LRRC40Q9H9A6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 AP000523.1-201ENST00000398242 1049 ntBASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 ECEL1P3-201ENST00000427961 737 ntBASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 AC024243.1-201ENST00000609234 778 ntBASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC40Q9H9A6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms