Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.95
SCAF1Q9H7N4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
SCAF1Q9H7N4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.95
SCAF1Q9H7N4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SCAF1Q9H7N4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SCAF1Q9H7N4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SCAF1Q9H7N4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SCAF1Q9H7N4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC27.2■■□□□ 1.94
SCAF1Q9H7N4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC27.2■■□□□ 1.94
SCAF1Q9H7N4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
SCAF1Q9H7N4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SCAF1Q9H7N4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC27.2■■□□□ 1.94
SCAF1Q9H7N4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
SCAF1Q9H7N4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SCAF1Q9H7N4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC27.2■■□□□ 1.94
SCAF1Q9H7N4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SCAF1Q9H7N4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
SCAF1Q9H7N4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC27.2■■□□□ 1.94
SCAF1Q9H7N4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 AL691432.2-201ENST00000607222 2038 ntBASIC27.19■■□□□ 1.94
SCAF1Q9H7N4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 FOSL1P1-201ENST00000511041 816 ntBASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 AC090164.3-201ENST00000610780 2143 ntBASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 TMEM179-206ENST00000616017 1645 ntBASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
SCAF1Q9H7N4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 HBZP1-201ENST00000354915 429 ntBASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms