Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DDX47Q9H0S4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
DDX47Q9H0S4 AC026271.3-201ENST00000571884 352 ntBASIC19.07■□□□□ 0.64
DDX47Q9H0S4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.07■□□□□ 0.64
DDX47Q9H0S4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX47Q9H0S4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX47Q9H0S4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DDX47Q9H0S4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX47Q9H0S4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX47Q9H0S4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.07■□□□□ 0.64
DDX47Q9H0S4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DDX47Q9H0S4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DDX47Q9H0S4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX47Q9H0S4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
DDX47Q9H0S4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DDX47Q9H0S4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DDX47Q9H0S4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX47Q9H0S4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.06■□□□□ 0.64
DDX47Q9H0S4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 AC034236.2-201ENST00000606662 1610 ntBASIC19.05■□□□□ 0.64
DDX47Q9H0S4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 ESRRAP1-201ENST00000400596 1257 ntBASIC19.05■□□□□ 0.64
DDX47Q9H0S4 HLA-L-209ENST00000420110 1011 ntBASIC19.05■□□□□ 0.64
DDX47Q9H0S4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 AC090192.1-201ENST00000517740 490 ntBASIC19.05■□□□□ 0.64
DDX47Q9H0S4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX47Q9H0S4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 MCCD1P1-208ENST00000445732 328 ntBASIC19.04■□□□□ 0.64
DDX47Q9H0S4 SDHAP2-201ENST00000455183 2001 ntBASIC19.04■□□□□ 0.64
DDX47Q9H0S4 B3GAT3P1-201ENST00000471720 806 ntBASIC19.04■□□□□ 0.64
DDX47Q9H0S4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms