Protein–RNA interactions for Protein: Q9C0H5

ARHGAP39, Rho GTPase-activating protein 39, humanhuman

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP39Q9C0H5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.59■□□□□ 0.89
ARHGAP39Q9C0H5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.59■□□□□ 0.89
ARHGAP39Q9C0H5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGAP39Q9C0H5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGAP39Q9C0H5 AC004817.3-201ENST00000602957 2129 ntBASIC20.59■□□□□ 0.89
ARHGAP39Q9C0H5 PCDHAC2-203ENST00000615316 3011 ntBASIC20.59■□□□□ 0.89
ARHGAP39Q9C0H5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
ARHGAP39Q9C0H5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGAP39Q9C0H5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGAP39Q9C0H5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.58■□□□□ 0.89
ARHGAP39Q9C0H5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGAP39Q9C0H5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGAP39Q9C0H5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGAP39Q9C0H5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGAP39Q9C0H5 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.58■□□□□ 0.89
ARHGAP39Q9C0H5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
ARHGAP39Q9C0H5 AL035633.1-201ENST00000406139 838 ntBASIC20.58■□□□□ 0.89
ARHGAP39Q9C0H5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGAP39Q9C0H5 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.58■□□□□ 0.89
ARHGAP39Q9C0H5 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.58■□□□□ 0.89
ARHGAP39Q9C0H5 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.58■□□□□ 0.89
ARHGAP39Q9C0H5 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.58■□□□□ 0.89
ARHGAP39Q9C0H5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.58■□□□□ 0.89
ARHGAP39Q9C0H5 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGAP39Q9C0H5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
ARHGAP39Q9C0H5 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ARHGAP39Q9C0H5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.58■□□□□ 0.88
ARHGAP39Q9C0H5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.88
ARHGAP39Q9C0H5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGAP39Q9C0H5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGAP39Q9C0H5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGAP39Q9C0H5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
ARHGAP39Q9C0H5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.58■□□□□ 0.88
ARHGAP39Q9C0H5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGAP39Q9C0H5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGAP39Q9C0H5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.58■□□□□ 0.88
ARHGAP39Q9C0H5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ARHGAP39Q9C0H5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGAP39Q9C0H5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ARHGAP39Q9C0H5 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGAP39Q9C0H5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGAP39Q9C0H5 AC073621.1-201ENST00000392730 636 ntBASIC20.57■□□□□ 0.88
ARHGAP39Q9C0H5 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.57■□□□□ 0.88
ARHGAP39Q9C0H5 AL645939.2-201ENST00000427340 991 ntBASIC20.57■□□□□ 0.88
ARHGAP39Q9C0H5 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.57■□□□□ 0.88
ARHGAP39Q9C0H5 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.57■□□□□ 0.88
ARHGAP39Q9C0H5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.57■□□□□ 0.88
ARHGAP39Q9C0H5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.57■□□□□ 0.88
ARHGAP39Q9C0H5 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGAP39Q9C0H5 AC106028.4-201ENST00000614509 607 ntBASIC20.57■□□□□ 0.88
ARHGAP39Q9C0H5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGAP39Q9C0H5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.57■□□□□ 0.88
ARHGAP39Q9C0H5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ARHGAP39Q9C0H5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGAP39Q9C0H5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.57■□□□□ 0.88
ARHGAP39Q9C0H5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGAP39Q9C0H5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGAP39Q9C0H5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.56■□□□□ 0.88
ARHGAP39Q9C0H5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ARHGAP39Q9C0H5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGAP39Q9C0H5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ARHGAP39Q9C0H5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGAP39Q9C0H5 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGAP39Q9C0H5 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.56■□□□□ 0.88
ARHGAP39Q9C0H5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.56■□□□□ 0.88
ARHGAP39Q9C0H5 AC254562.1-201ENST00000417586 456 ntBASIC20.56■□□□□ 0.88
ARHGAP39Q9C0H5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.56■□□□□ 0.88
ARHGAP39Q9C0H5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGAP39Q9C0H5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.56■□□□□ 0.88
ARHGAP39Q9C0H5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGAP39Q9C0H5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.56■□□□□ 0.88
ARHGAP39Q9C0H5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 MIR1199-201ENST00000621445 119 ntBASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 AC005593.1-201ENST00000624894 515 ntBASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGAP39Q9C0H5 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ARHGAP39Q9C0H5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.54■□□□□ 0.88
ARHGAP39Q9C0H5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.54■□□□□ 0.88
ARHGAP39Q9C0H5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms