Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 NKILA-202ENST00000614771 2598 ntBASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 HNRNPA1P40-201ENST00000426371 1278 ntBASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 AC133681.1-201ENST00000465482 601 ntBASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 AP003097.1-201ENST00000530657 1135 ntBASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 AC104771.1-201ENST00000603335 964 ntBASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 AL353708.3-201ENST00000610272 989 ntBASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 AC011298.2-201ENST00000617989 482 ntBASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 AC008267.7-201ENST00000624570 1194 ntBASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 GPAT2P1-201ENST00000444924 1672 ntBASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 AC093010.1-201ENST00000473625 1624 ntBASIC9.27□□□□□ -0.92
KRTAP3-1Q9BYR8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC9.27□□□□□ -0.92
KRTAP3-1Q9BYR8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
KRTAP3-1Q9BYR8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
KRTAP3-1Q9BYR8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC9.27□□□□□ -0.92
KRTAP3-1Q9BYR8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
KRTAP3-1Q9BYR8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
KRTAP3-1Q9BYR8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
KRTAP3-1Q9BYR8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
KRTAP3-1Q9BYR8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.92
KRTAP3-1Q9BYR8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC9.27□□□□□ -0.92
KRTAP3-1Q9BYR8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 AL163051.1-201ENST00000569214 1512 ntBASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 AC239809.2-201ENST00000415381 517 ntBASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 KSR1P1-201ENST00000446298 240 ntBASIC9.27□□□□□ -0.93
KRTAP3-1Q9BYR8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms