Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 IGHV3-71-201ENST00000523324 359 ntBASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 AL589182.2-201ENST00000619332 1049 ntBASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 AL121761.2-201ENST00000598007 1648 ntBASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 AC004817.3-201ENST00000602957 2129 ntBASIC18.14■□□□□ 0.5
LRFN3Q9BTN0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.14■□□□□ 0.5
LRFN3Q9BTN0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
LRFN3Q9BTN0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.14■□□□□ 0.5
LRFN3Q9BTN0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
LRFN3Q9BTN0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LRFN3Q9BTN0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LRFN3Q9BTN0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN3Q9BTN0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
LRFN3Q9BTN0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.14■□□□□ 0.49
LRFN3Q9BTN0 PRYP5-201ENST00000451909 266 ntBASIC18.14■□□□□ 0.49
LRFN3Q9BTN0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.14■□□□□ 0.49
LRFN3Q9BTN0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
LRFN3Q9BTN0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.14■□□□□ 0.49
LRFN3Q9BTN0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN3Q9BTN0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN3Q9BTN0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN3Q9BTN0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.14■□□□□ 0.49
LRFN3Q9BTN0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.14■□□□□ 0.49
LRFN3Q9BTN0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.14■□□□□ 0.49
LRFN3Q9BTN0 AL357033.4-201ENST00000617703 1807 ntBASIC18.14■□□□□ 0.49
LRFN3Q9BTN0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN3Q9BTN0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 AC051619.7-201ENST00000568314 623 ntBASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 AC010507.1-201ENST00000633895 436 ntBASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN3Q9BTN0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 CNN2P2-201ENST00000443536 909 ntBASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 CNN2P3-201ENST00000450201 906 ntBASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 RN7SL692P-201ENST00000464677 288 ntBASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 IGHV3-65-201ENST00000523210 341 ntBASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 AC096734.2-201ENST00000562054 433 ntBASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms