Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA3Q99618 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.95■□□□□ 0.62
CDCA3Q99618 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.95■□□□□ 0.62
CDCA3Q99618 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.95■□□□□ 0.62
CDCA3Q99618 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA3Q99618 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.95■□□□□ 0.62
CDCA3Q99618 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA3Q99618 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA3Q99618 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA3Q99618 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
CDCA3Q99618 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CDCA3Q99618 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA3Q99618 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA3Q99618 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CDCA3Q99618 AC009947.1-201ENST00000444350 727 ntBASIC18.95■□□□□ 0.62
CDCA3Q99618 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.95■□□□□ 0.62
CDCA3Q99618 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.95■□□□□ 0.62
CDCA3Q99618 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.95■□□□□ 0.62
CDCA3Q99618 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA3Q99618 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.95■□□□□ 0.62
CDCA3Q99618 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.95■□□□□ 0.62
CDCA3Q99618 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.95■□□□□ 0.62
CDCA3Q99618 MIR1199-201ENST00000621445 119 ntBASIC18.95■□□□□ 0.62
CDCA3Q99618 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CDCA3Q99618 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA3Q99618 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA3Q99618 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA3Q99618 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA3Q99618 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA3Q99618 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CDCA3Q99618 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA3Q99618 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDCA3Q99618 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA3Q99618 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.94■□□□□ 0.62
CDCA3Q99618 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.94■□□□□ 0.62
CDCA3Q99618 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDCA3Q99618 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDCA3Q99618 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDCA3Q99618 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDCA3Q99618 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.94■□□□□ 0.62
CDCA3Q99618 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDCA3Q99618 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.94■□□□□ 0.62
CDCA3Q99618 AC006557.2-201ENST00000592985 1240 ntBASIC18.94■□□□□ 0.62
CDCA3Q99618 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDCA3Q99618 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDCA3Q99618 AL022326.1-202ENST00000641533 845 ntBASIC18.94■□□□□ 0.62
CDCA3Q99618 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.94■□□□□ 0.62
CDCA3Q99618 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDCA3Q99618 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDCA3Q99618 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.94■□□□□ 0.62
CDCA3Q99618 AC097374.2-201ENST00000618617 1306 ntBASIC18.94■□□□□ 0.62
CDCA3Q99618 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDCA3Q99618 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDCA3Q99618 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CDCA3Q99618 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDCA3Q99618 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDCA3Q99618 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDCA3Q99618 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDCA3Q99618 AL032819.2-201ENST00000624543 2162 ntBASIC18.93■□□□□ 0.62
CDCA3Q99618 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDCA3Q99618 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDCA3Q99618 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CDCA3Q99618 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDCA3Q99618 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDCA3Q99618 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDCA3Q99618 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.93■□□□□ 0.62
CDCA3Q99618 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.93■□□□□ 0.62
CDCA3Q99618 AC007967.2-201ENST00000432613 625 ntBASIC18.93■□□□□ 0.62
CDCA3Q99618 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.93■□□□□ 0.62
CDCA3Q99618 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.93■□□□□ 0.62
CDCA3Q99618 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDCA3Q99618 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.93■□□□□ 0.62
CDCA3Q99618 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.93■□□□□ 0.62
CDCA3Q99618 AC005593.1-201ENST00000624894 515 ntBASIC18.93■□□□□ 0.62
CDCA3Q99618 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDCA3Q99618 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDCA3Q99618 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDCA3Q99618 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.93■□□□□ 0.62
CDCA3Q99618 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.93■□□□□ 0.62
CDCA3Q99618 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.93■□□□□ 0.62
CDCA3Q99618 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDCA3Q99618 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDCA3Q99618 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDCA3Q99618 AC079776.2-201ENST00000641154 1609 ntBASIC18.92■□□□□ 0.62
CDCA3Q99618 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDCA3Q99618 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.92■□□□□ 0.62
CDCA3Q99618 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDCA3Q99618 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDCA3Q99618 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.92■□□□□ 0.62
CDCA3Q99618 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.92■□□□□ 0.62
CDCA3Q99618 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDCA3Q99618 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.92■□□□□ 0.62
CDCA3Q99618 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.92■□□□□ 0.62
CDCA3Q99618 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.92■□□□□ 0.62
CDCA3Q99618 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.92■□□□□ 0.62
CDCA3Q99618 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.92■□□□□ 0.62
CDCA3Q99618 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.92■□□□□ 0.62
CDCA3Q99618 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.92■□□□□ 0.62
CDCA3Q99618 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.92■□□□□ 0.62
CDCA3Q99618 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms