Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL13Q99616 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.32■□□□□ 0.04
CCL13Q99616 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL13Q99616 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCL13Q99616 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CCL13Q99616 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL13Q99616 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.32■□□□□ 0.04
CCL13Q99616 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL13Q99616 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCL13Q99616 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL13Q99616 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL13Q99616 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL13Q99616 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL13Q99616 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCL13Q99616 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.31■□□□□ 0.04
CCL13Q99616 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CCL13Q99616 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.31■□□□□ 0.04
CCL13Q99616 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCL13Q99616 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.31■□□□□ 0.04
CCL13Q99616 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.31■□□□□ 0.04
CCL13Q99616 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.31■□□□□ 0.04
CCL13Q99616 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CCL13Q99616 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CCL13Q99616 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CCL13Q99616 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.31■□□□□ 0.04
CCL13Q99616 PVRIG2P-201ENST00000435460 978 ntBASIC15.31■□□□□ 0.04
CCL13Q99616 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.31■□□□□ 0.04
CCL13Q99616 AL136038.4-201ENST00000603606 1261 ntBASIC15.31■□□□□ 0.04
CCL13Q99616 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.31■□□□□ 0.04
CCL13Q99616 AC010331.1-201ENST00000611423 582 ntBASIC15.31■□□□□ 0.04
CCL13Q99616 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.31■□□□□ 0.04
CCL13Q99616 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.31■□□□□ 0.04
CCL13Q99616 LINC01311-201ENST00000565162 1445 ntBASIC15.31■□□□□ 0.04
CCL13Q99616 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CCL13Q99616 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCL13Q99616 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCL13Q99616 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.31■□□□□ 0.04
CCL13Q99616 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CCL13Q99616 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.31■□□□□ 0.04
CCL13Q99616 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.31■□□□□ 0.04
CCL13Q99616 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL13Q99616 AL391807.1-203ENST00000604392 2365 ntBASIC15.31■□□□□ 0.04
CCL13Q99616 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.31■□□□□ 0.04
CCL13Q99616 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.31■□□□□ 0.04
CCL13Q99616 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.3■□□□□ 0.04
CCL13Q99616 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL13Q99616 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL13Q99616 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL13Q99616 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL13Q99616 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL13Q99616 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL13Q99616 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.3■□□□□ 0.04
CCL13Q99616 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL13Q99616 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL13Q99616 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCL13Q99616 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCL13Q99616 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CCL13Q99616 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.3■□□□□ 0.04
CCL13Q99616 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL13Q99616 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCL13Q99616 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCL13Q99616 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCL13Q99616 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.3■□□□□ 0.04
CCL13Q99616 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.3■□□□□ 0.04
CCL13Q99616 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CCL13Q99616 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.3■□□□□ 0.04
CCL13Q99616 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.3■□□□□ 0.04
CCL13Q99616 AL671277.2-201ENST00000458060 996 ntBASIC15.3■□□□□ 0.04
CCL13Q99616 GMCL1P1-201ENST00000463439 1581 ntBASIC15.3■□□□□ 0.04
CCL13Q99616 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.3■□□□□ 0.04
CCL13Q99616 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.3■□□□□ 0.04
CCL13Q99616 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCL13Q99616 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.3■□□□□ 0.04
CCL13Q99616 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CCL13Q99616 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CCL13Q99616 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.3■□□□□ 0.04
CCL13Q99616 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms