Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV9Q99603 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV9Q99603 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV9Q99603 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.27□□□□□ -0.12
TRGV9Q99603 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV9Q99603 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TRGV9Q99603 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.27□□□□□ -0.12
TRGV9Q99603 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRGV9Q99603 HOXB1-202ENST00000577092 1414 ntBASIC14.27□□□□□ -0.12
TRGV9Q99603 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRGV9Q99603 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRGV9Q99603 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV9Q99603 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV9Q99603 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV9Q99603 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.27□□□□□ -0.13
TRGV9Q99603 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.27□□□□□ -0.13
TRGV9Q99603 NUDT16P1-203ENST00000513809 620 ntBASIC14.27□□□□□ -0.13
TRGV9Q99603 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.27□□□□□ -0.13
TRGV9Q99603 AC009065.1-201ENST00000564055 1225 ntBASIC14.27□□□□□ -0.13
TRGV9Q99603 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.27□□□□□ -0.13
TRGV9Q99603 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.27□□□□□ -0.13
TRGV9Q99603 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV9Q99603 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV9Q99603 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.27□□□□□ -0.13
TRGV9Q99603 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV9Q99603 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.27□□□□□ -0.13
TRGV9Q99603 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV9Q99603 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV9Q99603 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TRGV9Q99603 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
TRGV9Q99603 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV9Q99603 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.27□□□□□ -0.13
TRGV9Q99603 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.27□□□□□ -0.13
TRGV9Q99603 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV9Q99603 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRGV9Q99603 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV9Q99603 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV9Q99603 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV9Q99603 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.26□□□□□ -0.13
TRGV9Q99603 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.26□□□□□ -0.13
TRGV9Q99603 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.26□□□□□ -0.13
TRGV9Q99603 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRGV9Q99603 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 PKD1P1-201ENST00000458669 6805 ntBASIC14.26□□□□□ -0.13
TRGV9Q99603 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.26□□□□□ -0.13
TRGV9Q99603 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TRGV9Q99603 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRGV9Q99603 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
TRGV9Q99603 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRGV9Q99603 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 AC093010.1-201ENST00000473625 1624 ntBASIC14.26□□□□□ -0.13
TRGV9Q99603 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRGV9Q99603 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TRGV9Q99603 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV9Q99603 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRGV9Q99603 KRT18P55-202ENST00000578578 1546 ntBASIC14.25□□□□□ -0.13
TRGV9Q99603 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRGV9Q99603 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRGV9Q99603 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRGV9Q99603 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRGV9Q99603 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.25□□□□□ -0.13
TRGV9Q99603 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRGV9Q99603 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.25□□□□□ -0.13
TRGV9Q99603 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.25□□□□□ -0.13
TRGV9Q99603 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRGV9Q99603 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.25□□□□□ -0.13
TRGV9Q99603 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRGV9Q99603 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRGV9Q99603 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRGV9Q99603 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRGV9Q99603 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRGV9Q99603 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRGV9Q99603 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRGV9Q99603 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.25□□□□□ -0.13
TRGV9Q99603 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.25□□□□□ -0.13
TRGV9Q99603 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms