Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CLCC1Q96S66 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCC1Q96S66 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
CLCC1Q96S66 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCC1Q96S66 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CLCC1Q96S66 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCC1Q96S66 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCC1Q96S66 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCC1Q96S66 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCC1Q96S66 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCC1Q96S66 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCC1Q96S66 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCC1Q96S66 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCC1Q96S66 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCC1Q96S66 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCC1Q96S66 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCC1Q96S66 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCC1Q96S66 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCC1Q96S66 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCC1Q96S66 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.4■□□□□ 0.06
CLCC1Q96S66 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.06
CLCC1Q96S66 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCC1Q96S66 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCC1Q96S66 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCC1Q96S66 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCC1Q96S66 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCC1Q96S66 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCC1Q96S66 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCC1Q96S66 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCC1Q96S66 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCC1Q96S66 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCC1Q96S66 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCC1Q96S66 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCC1Q96S66 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCC1Q96S66 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.39■□□□□ 0.05
CLCC1Q96S66 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLCC1Q96S66 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CLCC1Q96S66 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.39■□□□□ 0.05
CLCC1Q96S66 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCC1Q96S66 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCC1Q96S66 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCC1Q96S66 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.39■□□□□ 0.05
CLCC1Q96S66 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCC1Q96S66 KRT16P5-201ENST00000455284 522 ntBASIC15.39■□□□□ 0.05
CLCC1Q96S66 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CLCC1Q96S66 RPPH1-201ENST00000516869 333 ntBASIC15.39■□□□□ 0.05
CLCC1Q96S66 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCC1Q96S66 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
CLCC1Q96S66 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCC1Q96S66 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCC1Q96S66 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCC1Q96S66 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
CLCC1Q96S66 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCC1Q96S66 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCC1Q96S66 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCC1Q96S66 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCC1Q96S66 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCC1Q96S66 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCC1Q96S66 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCC1Q96S66 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms