Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.19■□□□□ 0.02
GAFA1Q96PS6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 SPDYE13P-201ENST00000445314 798 ntBASIC15.19■□□□□ 0.02
GAFA1Q96PS6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GAFA1Q96PS6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 AL354751.1-201ENST00000412768 1863 ntBASIC15.18■□□□□ 0.02
GAFA1Q96PS6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 ABALON-201ENST00000629058 1903 ntBASIC15.18■□□□□ 0.02
GAFA1Q96PS6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.18■□□□□ 0.02
GAFA1Q96PS6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 KRT18P48-201ENST00000434763 852 ntBASIC15.18■□□□□ 0.02
GAFA1Q96PS6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 ZNF444P1-201ENST00000559497 298 ntBASIC15.18■□□□□ 0.02
GAFA1Q96PS6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GAFA1Q96PS6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 AL096828.2-201ENST00000567259 1965 ntBASIC15.17■□□□□ 0.02
GAFA1Q96PS6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 KRT89P-201ENST00000620027 1478 ntBASIC15.17■□□□□ 0.02
GAFA1Q96PS6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 MIR662-201ENST00000384847 95 ntBASIC15.17■□□□□ 0.02
GAFA1Q96PS6 AL031133.1-201ENST00000406807 723 ntBASIC15.17■□□□□ 0.02
GAFA1Q96PS6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms