Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.4■□□□□ 0.54
SHDQ96IW2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.4■□□□□ 0.54
SHDQ96IW2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
SHDQ96IW2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.4■□□□□ 0.54
SHDQ96IW2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.4■□□□□ 0.54
SHDQ96IW2 NKAPP1-205ENST00000585790 367 ntBASIC18.4■□□□□ 0.54
SHDQ96IW2 PGM5P2-202ENST00000637225 1043 ntBASIC18.4■□□□□ 0.54
SHDQ96IW2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SHDQ96IW2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHDQ96IW2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SHDQ96IW2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHDQ96IW2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SHDQ96IW2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SHDQ96IW2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.39■□□□□ 0.54
SHDQ96IW2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SHDQ96IW2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHDQ96IW2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHDQ96IW2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHDQ96IW2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SHDQ96IW2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHDQ96IW2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHDQ96IW2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHDQ96IW2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHDQ96IW2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHDQ96IW2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.39■□□□□ 0.53
SHDQ96IW2 AC211486.1-202ENST00000416371 468 ntBASIC18.39■□□□□ 0.53
SHDQ96IW2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.39■□□□□ 0.53
SHDQ96IW2 DNAJB3-202ENST00000449667 1266 ntBASIC18.39■□□□□ 0.53
SHDQ96IW2 AC211476.1-201ENST00000503899 468 ntBASIC18.39■□□□□ 0.53
SHDQ96IW2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.39■□□□□ 0.53
SHDQ96IW2 MIR1199-201ENST00000621445 119 ntBASIC18.39■□□□□ 0.53
SHDQ96IW2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SHDQ96IW2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHDQ96IW2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHDQ96IW2 LINC01006-201ENST00000333319 2292 ntBASIC18.39■□□□□ 0.53
SHDQ96IW2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHDQ96IW2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHDQ96IW2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.39■□□□□ 0.53
SHDQ96IW2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHDQ96IW2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHDQ96IW2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHDQ96IW2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHDQ96IW2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHDQ96IW2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHDQ96IW2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.39■□□□□ 0.53
SHDQ96IW2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.39■□□□□ 0.53
SHDQ96IW2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SHDQ96IW2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHDQ96IW2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.38■□□□□ 0.53
SHDQ96IW2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHDQ96IW2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHDQ96IW2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHDQ96IW2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHDQ96IW2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHDQ96IW2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.38■□□□□ 0.53
SHDQ96IW2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SHDQ96IW2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHDQ96IW2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHDQ96IW2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SHDQ96IW2 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.38■□□□□ 0.53
SHDQ96IW2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SHDQ96IW2 AC007967.2-201ENST00000432613 625 ntBASIC18.38■□□□□ 0.53
SHDQ96IW2 KRT18P65-201ENST00000439811 1286 ntBASIC18.38■□□□□ 0.53
SHDQ96IW2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHDQ96IW2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.38■□□□□ 0.53
SHDQ96IW2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.38■□□□□ 0.53
SHDQ96IW2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHDQ96IW2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.38■□□□□ 0.53
SHDQ96IW2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.38■□□□□ 0.53
SHDQ96IW2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHDQ96IW2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHDQ96IW2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHDQ96IW2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHDQ96IW2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHDQ96IW2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.38■□□□□ 0.53
SHDQ96IW2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SHDQ96IW2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHDQ96IW2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHDQ96IW2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHDQ96IW2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.37■□□□□ 0.53
SHDQ96IW2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.37■□□□□ 0.53
SHDQ96IW2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.37■□□□□ 0.53
SHDQ96IW2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SHDQ96IW2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHDQ96IW2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.37■□□□□ 0.53
SHDQ96IW2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHDQ96IW2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHDQ96IW2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.37■□□□□ 0.53
SHDQ96IW2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SHDQ96IW2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.37■□□□□ 0.53
SHDQ96IW2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.37■□□□□ 0.53
SHDQ96IW2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.37■□□□□ 0.53
SHDQ96IW2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.37■□□□□ 0.53
SHDQ96IW2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHDQ96IW2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.37■□□□□ 0.53
SHDQ96IW2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.37■□□□□ 0.53
SHDQ96IW2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.37■□□□□ 0.53
SHDQ96IW2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.37■□□□□ 0.53
SHDQ96IW2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHDQ96IW2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms