Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SLC47A1Q96FL8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 AL645608.8-201ENST00000606034 2086 ntBASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 FAM197Y4-202ENST00000622692 608 ntBASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 AL031985.4-201ENST00000642138 673 ntBASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 KRT16P1-201ENST00000399124 1418 ntBASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC47A1Q96FL8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 KRT18P29-201ENST00000397031 1267 ntBASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 AC004951.3-201ENST00000418645 1148 ntBASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 AC073195.1-201ENST00000607241 877 ntBASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 ITM2C-210ENST00000620962 501 ntBASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 AL096828.2-201ENST00000567259 1965 ntBASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC47A1Q96FL8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 AC026271.3-201ENST00000571884 352 ntBASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 AF186192.3-201ENST00000583427 947 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms