Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX11Q96FC9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX11Q96FC9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX11Q96FC9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX11Q96FC9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX11Q96FC9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX11Q96FC9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX11Q96FC9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX11Q96FC9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX11Q96FC9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX11Q96FC9 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX11Q96FC9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DDX11Q96FC9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DDX11Q96FC9 ZNF444P1-201ENST00000559497 298 ntBASIC21.71■■□□□ 1.07
DDX11Q96FC9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.71■■□□□ 1.07
DDX11Q96FC9 CR769767.2-201ENST00000622735 460 ntBASIC21.71■■□□□ 1.07
DDX11Q96FC9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX11Q96FC9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX11Q96FC9 AL133373.2-201ENST00000623187 2828 ntBASIC21.71■■□□□ 1.07
DDX11Q96FC9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
DDX11Q96FC9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX11Q96FC9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DDX11Q96FC9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX11Q96FC9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX11Q96FC9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DDX11Q96FC9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX11Q96FC9 AL354751.1-201ENST00000412768 1863 ntBASIC21.71■■□□□ 1.07
DDX11Q96FC9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DDX11Q96FC9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX11Q96FC9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.7■■□□□ 1.06
DDX11Q96FC9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
DDX11Q96FC9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX11Q96FC9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX11Q96FC9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX11Q96FC9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX11Q96FC9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX11Q96FC9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX11Q96FC9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.7■■□□□ 1.06
DDX11Q96FC9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX11Q96FC9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.7■■□□□ 1.06
DDX11Q96FC9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
DDX11Q96FC9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.7■■□□□ 1.06
DDX11Q96FC9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.7■■□□□ 1.06
DDX11Q96FC9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX11Q96FC9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX11Q96FC9 LINC01311-201ENST00000565162 1445 ntBASIC21.7■■□□□ 1.06
DDX11Q96FC9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX11Q96FC9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.7■■□□□ 1.06
DDX11Q96FC9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.7■■□□□ 1.06
DDX11Q96FC9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX11Q96FC9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX11Q96FC9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX11Q96FC9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
DDX11Q96FC9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.69■■□□□ 1.06
DDX11Q96FC9 MCCD1P1-208ENST00000445732 328 ntBASIC21.69■■□□□ 1.06
DDX11Q96FC9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.69■■□□□ 1.06
DDX11Q96FC9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
DDX11Q96FC9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.69■■□□□ 1.06
DDX11Q96FC9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX11Q96FC9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.69■■□□□ 1.06
DDX11Q96FC9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.69■■□□□ 1.06
DDX11Q96FC9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX11Q96FC9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX11Q96FC9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.69■■□□□ 1.06
DDX11Q96FC9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.69■■□□□ 1.06
DDX11Q96FC9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX11Q96FC9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX11Q96FC9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX11Q96FC9 AC005332.8-201ENST00000622750 2735 ntBASIC21.69■■□□□ 1.06
DDX11Q96FC9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX11Q96FC9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX11Q96FC9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX11Q96FC9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
DDX11Q96FC9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
DDX11Q96FC9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX11Q96FC9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX11Q96FC9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX11Q96FC9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX11Q96FC9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX11Q96FC9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX11Q96FC9 KRT18P48-201ENST00000434763 852 ntBASIC21.68■■□□□ 1.06
DDX11Q96FC9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.68■■□□□ 1.06
DDX11Q96FC9 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.68■■□□□ 1.06
DDX11Q96FC9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX11Q96FC9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.68■■□□□ 1.06
DDX11Q96FC9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX11Q96FC9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX11Q96FC9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX11Q96FC9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX11Q96FC9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX11Q96FC9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX11Q96FC9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX11Q96FC9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX11Q96FC9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX11Q96FC9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX11Q96FC9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
DDX11Q96FC9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX11Q96FC9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX11Q96FC9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
DDX11Q96FC9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms