Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF31Q96EP0 KRT18P1-202ENST00000452408 1331 ntBASIC17.63■□□□□ 0.41
RNF31Q96EP0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF31Q96EP0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF31Q96EP0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF31Q96EP0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RNF31Q96EP0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RNF31Q96EP0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RNF31Q96EP0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF31Q96EP0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF31Q96EP0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RNF31Q96EP0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF31Q96EP0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF31Q96EP0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF31Q96EP0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RNF31Q96EP0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF31Q96EP0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RNF31Q96EP0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RNF31Q96EP0 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF31Q96EP0 Z83836.1-201ENST00000624605 1642 ntBASIC17.62■□□□□ 0.41
RNF31Q96EP0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RNF31Q96EP0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF31Q96EP0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF31Q96EP0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF31Q96EP0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF31Q96EP0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF31Q96EP0 MIR564-202ENST00000385049 94 ntBASIC17.62■□□□□ 0.41
RNF31Q96EP0 AL845331.1-201ENST00000424978 1190 ntBASIC17.62■□□□□ 0.41
RNF31Q96EP0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF31Q96EP0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RNF31Q96EP0 LINC00265-3P-201ENST00000447588 903 ntBASIC17.62■□□□□ 0.41
RNF31Q96EP0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.62■□□□□ 0.41
RNF31Q96EP0 AP000867.3-201ENST00000524675 377 ntBASIC17.62■□□□□ 0.41
RNF31Q96EP0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.62■□□□□ 0.41
RNF31Q96EP0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF31Q96EP0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RNF31Q96EP0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF31Q96EP0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF31Q96EP0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF31Q96EP0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF31Q96EP0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF31Q96EP0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF31Q96EP0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RNF31Q96EP0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF31Q96EP0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF31Q96EP0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF31Q96EP0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF31Q96EP0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RNF31Q96EP0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RNF31Q96EP0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF31Q96EP0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
RNF31Q96EP0 LTB4R2-202ENST00000528054 3092 ntBASIC17.61■□□□□ 0.41
RNF31Q96EP0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RNF31Q96EP0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
RNF31Q96EP0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
RNF31Q96EP0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF31Q96EP0 AC246785.2-201ENST00000432512 513 ntBASIC17.61■□□□□ 0.41
RNF31Q96EP0 HLA-F-220ENST00000434407 884 ntBASIC17.61■□□□□ 0.41
RNF31Q96EP0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF31Q96EP0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF31Q96EP0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF31Q96EP0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 AL732292.2-201ENST00000609649 430 ntBASIC17.61■□□□□ 0.41
RNF31Q96EP0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RNF31Q96EP0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RNF31Q96EP0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RNF31Q96EP0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RNF31Q96EP0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF31Q96EP0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RNF31Q96EP0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF31Q96EP0 AL357033.4-201ENST00000617703 1807 ntBASIC17.61■□□□□ 0.41
RNF31Q96EP0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF31Q96EP0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF31Q96EP0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF31Q96EP0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF31Q96EP0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF31Q96EP0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RNF31Q96EP0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF31Q96EP0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF31Q96EP0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF31Q96EP0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms