Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RTP4Q96DX8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.64■□□□□ 0.58
RTP4Q96DX8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.64■□□□□ 0.58
RTP4Q96DX8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RTP4Q96DX8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RTP4Q96DX8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTP4Q96DX8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RTP4Q96DX8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTP4Q96DX8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.64■□□□□ 0.57
RTP4Q96DX8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTP4Q96DX8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
RTP4Q96DX8 KRT18P57-201ENST00000443599 1254 ntBASIC18.64■□□□□ 0.57
RTP4Q96DX8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.64■□□□□ 0.57
RTP4Q96DX8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTP4Q96DX8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.64■□□□□ 0.57
RTP4Q96DX8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.64■□□□□ 0.57
RTP4Q96DX8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.64■□□□□ 0.57
RTP4Q96DX8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTP4Q96DX8 NEK4P2-201ENST00000580004 1012 ntBASIC18.64■□□□□ 0.57
RTP4Q96DX8 AL590326.2-201ENST00000625139 305 ntBASIC18.64■□□□□ 0.57
RTP4Q96DX8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RTP4Q96DX8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTP4Q96DX8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTP4Q96DX8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTP4Q96DX8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTP4Q96DX8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RTP4Q96DX8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTP4Q96DX8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTP4Q96DX8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTP4Q96DX8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTP4Q96DX8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTP4Q96DX8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTP4Q96DX8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTP4Q96DX8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RTP4Q96DX8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTP4Q96DX8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RTP4Q96DX8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTP4Q96DX8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.63■□□□□ 0.57
RTP4Q96DX8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTP4Q96DX8 TERF1P1-201ENST00000311003 1181 ntBASIC18.63■□□□□ 0.57
RTP4Q96DX8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RTP4Q96DX8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.63■□□□□ 0.57
RTP4Q96DX8 AL137013.1-201ENST00000432946 1228 ntBASIC18.63■□□□□ 0.57
RTP4Q96DX8 SLC25A3P1-201ENST00000443844 931 ntBASIC18.63■□□□□ 0.57
RTP4Q96DX8 AC009947.2-201ENST00000444014 672 ntBASIC18.63■□□□□ 0.57
RTP4Q96DX8 AL512604.3-201ENST00000569583 964 ntBASIC18.63■□□□□ 0.57
RTP4Q96DX8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTP4Q96DX8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTP4Q96DX8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTP4Q96DX8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RTP4Q96DX8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTP4Q96DX8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RTP4Q96DX8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTP4Q96DX8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RTP4Q96DX8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.63■□□□□ 0.57
RTP4Q96DX8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTP4Q96DX8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTP4Q96DX8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTP4Q96DX8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTP4Q96DX8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTP4Q96DX8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTP4Q96DX8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTP4Q96DX8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RTP4Q96DX8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTP4Q96DX8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.62■□□□□ 0.57
RTP4Q96DX8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTP4Q96DX8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTP4Q96DX8 HMGA1P5-201ENST00000412453 271 ntBASIC18.62■□□□□ 0.57
RTP4Q96DX8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.62■□□□□ 0.57
RTP4Q96DX8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.62■□□□□ 0.57
RTP4Q96DX8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.62■□□□□ 0.57
RTP4Q96DX8 DUTP2-201ENST00000519164 463 ntBASIC18.62■□□□□ 0.57
RTP4Q96DX8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.62■□□□□ 0.57
RTP4Q96DX8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.62■□□□□ 0.57
RTP4Q96DX8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RTP4Q96DX8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTP4Q96DX8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
RTP4Q96DX8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTP4Q96DX8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTP4Q96DX8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.62■□□□□ 0.57
RTP4Q96DX8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.62■□□□□ 0.57
RTP4Q96DX8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTP4Q96DX8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
RTP4Q96DX8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.62■□□□□ 0.57
RTP4Q96DX8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTP4Q96DX8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTP4Q96DX8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTP4Q96DX8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTP4Q96DX8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTP4Q96DX8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.61■□□□□ 0.57
RTP4Q96DX8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTP4Q96DX8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RTP4Q96DX8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RTP4Q96DX8 AC073508.3-201ENST00000619697 1419 ntBASIC18.61■□□□□ 0.57
RTP4Q96DX8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTP4Q96DX8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTP4Q96DX8 ARMC10P1-201ENST00000313754 855 ntBASIC18.61■□□□□ 0.57
RTP4Q96DX8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTP4Q96DX8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTP4Q96DX8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms