Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ECHDC3Q96DC8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.24■□□□□ 0.51
ECHDC3Q96DC8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ECHDC3Q96DC8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
ECHDC3Q96DC8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.24■□□□□ 0.51
ECHDC3Q96DC8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ECHDC3Q96DC8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ECHDC3Q96DC8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ECHDC3Q96DC8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ECHDC3Q96DC8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ECHDC3Q96DC8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.24■□□□□ 0.51
ECHDC3Q96DC8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ECHDC3Q96DC8 AC093458.2-201ENST00000623150 629 ntBASIC18.24■□□□□ 0.51
ECHDC3Q96DC8 AC009113.1-201ENST00000570267 2443 ntBASIC18.24■□□□□ 0.51
ECHDC3Q96DC8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ECHDC3Q96DC8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ECHDC3Q96DC8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ECHDC3Q96DC8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.24■□□□□ 0.51
ECHDC3Q96DC8 AC093010.1-201ENST00000473625 1624 ntBASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ECHDC3Q96DC8 LINC00602-201ENST00000629776 2065 ntBASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 AC132938.6-201ENST00000623828 1655 ntBASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 DRAXINP1-201ENST00000437611 948 ntBASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ECHDC3Q96DC8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 AC135776.1-201ENST00000319817 2481 ntBASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 GUSBP12-201ENST00000513727 720 ntBASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 AP002414.4-201ENST00000589764 1148 ntBASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 AL353801.3-201ENST00000609898 542 ntBASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 AL592071.1-201ENST00000611956 408 ntBASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 AC009154.2-201ENST00000621177 724 ntBASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms