Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN23Q96B33 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN23Q96B33 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN23Q96B33 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN23Q96B33 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN23Q96B33 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.19■□□□□ 0.5
CLDN23Q96B33 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
CLDN23Q96B33 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.19■□□□□ 0.5
CLDN23Q96B33 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN23Q96B33 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN23Q96B33 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN23Q96B33 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN23Q96B33 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN23Q96B33 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN23Q96B33 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CLDN23Q96B33 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN23Q96B33 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CLDN23Q96B33 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN23Q96B33 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CLDN23Q96B33 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN23Q96B33 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CLDN23Q96B33 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDN23Q96B33 YBX1P5-201ENST00000509441 847 ntBASIC18.18■□□□□ 0.5
CLDN23Q96B33 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN23Q96B33 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.18■□□□□ 0.5
CLDN23Q96B33 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.18■□□□□ 0.5
CLDN23Q96B33 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.18■□□□□ 0.5
CLDN23Q96B33 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN23Q96B33 AC064836.3-201ENST00000607928 673 ntBASIC18.18■□□□□ 0.5
CLDN23Q96B33 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN23Q96B33 AC079776.2-201ENST00000641154 1609 ntBASIC18.18■□□□□ 0.5
CLDN23Q96B33 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CLDN23Q96B33 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN23Q96B33 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
CLDN23Q96B33 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN23Q96B33 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN23Q96B33 MYLKP1-201ENST00000509077 1580 ntBASIC18.17■□□□□ 0.5
CLDN23Q96B33 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN23Q96B33 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN23Q96B33 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN23Q96B33 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 AC112698.1-201ENST00000510299 916 ntBASIC18.17■□□□□ 0.5
CLDN23Q96B33 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 AC005829.1-201ENST00000570002 483 ntBASIC18.17■□□□□ 0.5
CLDN23Q96B33 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN23Q96B33 AL022326.1-202ENST00000641533 845 ntBASIC18.17■□□□□ 0.5
CLDN23Q96B33 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN23Q96B33 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN23Q96B33 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN23Q96B33 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN23Q96B33 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN23Q96B33 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CLDN23Q96B33 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN23Q96B33 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN23Q96B33 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN23Q96B33 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN23Q96B33 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN23Q96B33 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN23Q96B33 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN23Q96B33 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN23Q96B33 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN23Q96B33 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN23Q96B33 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CLDN23Q96B33 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLDN23Q96B33 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CLDN23Q96B33 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.16■□□□□ 0.5
CLDN23Q96B33 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN23Q96B33 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN23Q96B33 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN23Q96B33 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN23Q96B33 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.16■□□□□ 0.5
CLDN23Q96B33 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.16■□□□□ 0.5
CLDN23Q96B33 MIR1199-201ENST00000621445 119 ntBASIC18.16■□□□□ 0.5
CLDN23Q96B33 AC005593.1-201ENST00000624894 515 ntBASIC18.16■□□□□ 0.5
CLDN23Q96B33 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN23Q96B33 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN23Q96B33 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN23Q96B33 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CLDN23Q96B33 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN23Q96B33 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms