Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 FLJ13224-201ENST00000313737 1514 ntBASIC17.59■□□□□ 0.41
VPS33AQ96AX1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 AC026271.3-201ENST00000571884 352 ntBASIC17.59■□□□□ 0.41
VPS33AQ96AX1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS33AQ96AX1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VPS33AQ96AX1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
VPS33AQ96AX1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
VPS33AQ96AX1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VPS33AQ96AX1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VPS33AQ96AX1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.58■□□□□ 0.41
VPS33AQ96AX1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
VPS33AQ96AX1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.58■□□□□ 0.41
VPS33AQ96AX1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS33AQ96AX1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS33AQ96AX1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS33AQ96AX1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS33AQ96AX1 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.58■□□□□ 0.4
VPS33AQ96AX1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.58■□□□□ 0.4
VPS33AQ96AX1 AC006058.3-201ENST00000606217 1069 ntBASIC17.58■□□□□ 0.4
VPS33AQ96AX1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
VPS33AQ96AX1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS33AQ96AX1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS33AQ96AX1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
VPS33AQ96AX1 PHGDH-209ENST00000641074 1780 ntBASIC17.58■□□□□ 0.4
VPS33AQ96AX1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS33AQ96AX1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
VPS33AQ96AX1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS33AQ96AX1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 MIR564-202ENST00000385049 94 ntBASIC17.57■□□□□ 0.4
VPS33AQ96AX1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 GMCL1P1-201ENST00000463439 1581 ntBASIC17.57■□□□□ 0.4
VPS33AQ96AX1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
VPS33AQ96AX1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS33AQ96AX1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS33AQ96AX1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VPS33AQ96AX1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.56■□□□□ 0.4
VPS33AQ96AX1 AC012317.2-201ENST00000623305 2251 ntBASIC17.56■□□□□ 0.4
VPS33AQ96AX1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS33AQ96AX1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS33AQ96AX1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS33AQ96AX1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS33AQ96AX1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
VPS33AQ96AX1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS33AQ96AX1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VPS33AQ96AX1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS33AQ96AX1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.56■□□□□ 0.4
VPS33AQ96AX1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS33AQ96AX1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms