Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
DDX1Q92499 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX1Q92499 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDX1Q92499 MIR3917-201ENST00000580971 93 ntBASIC19.48■□□□□ 0.71
DDX1Q92499 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.48■□□□□ 0.71
DDX1Q92499 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDX1Q92499 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDX1Q92499 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX1Q92499 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX1Q92499 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX1Q92499 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX1Q92499 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.47■□□□□ 0.71
DDX1Q92499 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDX1Q92499 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
DDX1Q92499 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX1Q92499 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
DDX1Q92499 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.47■□□□□ 0.71
DDX1Q92499 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX1Q92499 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX1Q92499 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX1Q92499 AC117947.1-201ENST00000427448 529 ntBASIC19.47■□□□□ 0.71
DDX1Q92499 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
DDX1Q92499 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDX1Q92499 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
DDX1Q92499 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX1Q92499 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
DDX1Q92499 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.47■□□□□ 0.71
DDX1Q92499 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX1Q92499 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX1Q92499 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.47■□□□□ 0.71
DDX1Q92499 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX1Q92499 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX1Q92499 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX1Q92499 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX1Q92499 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX1Q92499 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
DDX1Q92499 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX1Q92499 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
DDX1Q92499 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX1Q92499 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
DDX1Q92499 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX1Q92499 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX1Q92499 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX1Q92499 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX1Q92499 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX1Q92499 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX1Q92499 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.46■□□□□ 0.71
DDX1Q92499 PCED1CP-201ENST00000419887 785 ntBASIC19.46■□□□□ 0.71
DDX1Q92499 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX1Q92499 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.46■□□□□ 0.71
DDX1Q92499 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.46■□□□□ 0.71
DDX1Q92499 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.46■□□□□ 0.71
DDX1Q92499 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
DDX1Q92499 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
DDX1Q92499 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.46■□□□□ 0.71
DDX1Q92499 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.46■□□□□ 0.71
DDX1Q92499 AC009065.1-201ENST00000564055 1225 ntBASIC19.46■□□□□ 0.71
DDX1Q92499 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX1Q92499 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.46■□□□□ 0.71
DDX1Q92499 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX1Q92499 AC093010.1-201ENST00000473625 1624 ntBASIC19.46■□□□□ 0.71
DDX1Q92499 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
DDX1Q92499 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX1Q92499 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX1Q92499 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX1Q92499 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX1Q92499 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
DDX1Q92499 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX1Q92499 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX1Q92499 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX1Q92499 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX1Q92499 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
DDX1Q92499 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX1Q92499 IER3-202ENST00000376377 1350 ntBASIC19.45■□□□□ 0.7
DDX1Q92499 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
DDX1Q92499 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX1Q92499 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX1Q92499 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
DDX1Q92499 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX1Q92499 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX1Q92499 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
DDX1Q92499 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX1Q92499 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
DDX1Q92499 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
DDX1Q92499 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.45■□□□□ 0.7
DDX1Q92499 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.45■□□□□ 0.7
DDX1Q92499 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
DDX1Q92499 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.45■□□□□ 0.7
DDX1Q92499 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
DDX1Q92499 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.45■□□□□ 0.7
DDX1Q92499 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.45■□□□□ 0.7
DDX1Q92499 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.45■□□□□ 0.7
DDX1Q92499 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.45■□□□□ 0.7
DDX1Q92499 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.45■□□□□ 0.7
DDX1Q92499 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.45■□□□□ 0.7
DDX1Q92499 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.45■□□□□ 0.7
DDX1Q92499 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX1Q92499 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX1Q92499 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.45■□□□□ 0.7
DDX1Q92499 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms