Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 FAM207BP-201ENST00000447172 505 ntBASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 AC011506.1-201ENST00000474329 610 ntBASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 AC130371.2-201ENST00000619443 611 ntBASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 PRORSD1P-202ENST00000563365 2154 ntBASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RTN4IP1Q8WWV3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN4IP1Q8WWV3 KRT8P32-201ENST00000512863 1461 ntBASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 MESTP1-201ENST00000404287 994 ntBASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms