Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 AL359075.1-203ENST00000462729 1002 ntBASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 AC009102.3-201ENST00000623118 1491 ntBASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 AC138028.4-201ENST00000564984 1845 ntBASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 AC024243.1-201ENST00000609234 778 ntBASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 REXO1L9P-201ENST00000604264 2108 ntBASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMARCC2Q8TAQ2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 AL096828.2-201ENST00000567259 1965 ntBASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 AC104390.1-201ENST00000555663 520 ntBASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMARCC2Q8TAQ2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.39■■□□□ 1.02
SMARCC2Q8TAQ2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.39■■□□□ 1.02
SMARCC2Q8TAQ2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.39■■□□□ 1.02
SMARCC2Q8TAQ2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
SMARCC2Q8TAQ2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMARCC2Q8TAQ2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.39■■□□□ 1.01
SMARCC2Q8TAQ2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
SMARCC2Q8TAQ2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMARCC2Q8TAQ2 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.39■■□□□ 1.01
SMARCC2Q8TAQ2 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.39■■□□□ 1.01
SMARCC2Q8TAQ2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.39■■□□□ 1.01
SMARCC2Q8TAQ2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.39■■□□□ 1.01
SMARCC2Q8TAQ2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.39■■□□□ 1.01
SMARCC2Q8TAQ2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.39■■□□□ 1.01
SMARCC2Q8TAQ2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SMARCC2Q8TAQ2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
SMARCC2Q8TAQ2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SMARCC2Q8TAQ2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SMARCC2Q8TAQ2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMARCC2Q8TAQ2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.39■■□□□ 1.01
SMARCC2Q8TAQ2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
SMARCC2Q8TAQ2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SMARCC2Q8TAQ2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMARCC2Q8TAQ2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms