Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 HLA-F-220ENST00000434407 884 ntBASIC19.59■□□□□ 0.73
LMO3Q8TAP4 KRT18P38-201ENST00000449496 1282 ntBASIC19.59■□□□□ 0.73
LMO3Q8TAP4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 AC034232.1-201ENST00000506026 1064 ntBASIC19.59■□□□□ 0.73
LMO3Q8TAP4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LMO3Q8TAP4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LMO3Q8TAP4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LMO3Q8TAP4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LMO3Q8TAP4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LMO3Q8TAP4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LMO3Q8TAP4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LMO3Q8TAP4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LMO3Q8TAP4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LMO3Q8TAP4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
LMO3Q8TAP4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LMO3Q8TAP4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LMO3Q8TAP4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.58■□□□□ 0.72
LMO3Q8TAP4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LMO3Q8TAP4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LMO3Q8TAP4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LMO3Q8TAP4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LMO3Q8TAP4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.58■□□□□ 0.72
LMO3Q8TAP4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.58■□□□□ 0.72
LMO3Q8TAP4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LMO3Q8TAP4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
LMO3Q8TAP4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
LMO3Q8TAP4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
LMO3Q8TAP4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LMO3Q8TAP4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
LMO3Q8TAP4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LMO3Q8TAP4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
LMO3Q8TAP4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.58■□□□□ 0.72
LMO3Q8TAP4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
LMO3Q8TAP4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
LMO3Q8TAP4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 RCN1P1-201ENST00000400413 996 ntBASIC19.57■□□□□ 0.72
LMO3Q8TAP4 TSPY5P-201ENST00000426936 936 ntBASIC19.57■□□□□ 0.72
LMO3Q8TAP4 AC092597.1-201ENST00000487352 616 ntBASIC19.57■□□□□ 0.72
LMO3Q8TAP4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 DUTP2-201ENST00000519164 463 ntBASIC19.57■□□□□ 0.72
LMO3Q8TAP4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.57■□□□□ 0.72
LMO3Q8TAP4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LMO3Q8TAP4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 AC005332.8-201ENST00000622750 2735 ntBASIC19.56■□□□□ 0.72
LMO3Q8TAP4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 RNF152P1-201ENST00000397754 604 ntBASIC19.56■□□□□ 0.72
LMO3Q8TAP4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 AL136038.4-201ENST00000603606 1261 ntBASIC19.56■□□□□ 0.72
LMO3Q8TAP4 HYMAI.1-201ENST00000620949 238 ntBASIC19.56■□□□□ 0.72
LMO3Q8TAP4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms