Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 AL096828.2-201ENST00000567259 1965 ntBASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLHC1Q8NHS4 AC134043.2-201ENST00000624206 2238 ntBASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 AL390955.1-201ENST00000428694 934 ntBASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 GMCL1P1-201ENST00000463439 1581 ntBASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLHC1Q8NHS4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 OR6D1P-202ENST00000641007 5290 ntBASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 PKD1P1-201ENST00000458669 6805 ntBASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 RBM17P1-201ENST00000453646 1190 ntBASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 PHGDH-209ENST00000641074 1780 ntBASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLHC1Q8NHS4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 AP000997.3-201ENST00000623333 2250 ntBASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 AP003041.3-201ENST00000527151 707 ntBASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms