Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 KRT18P23-201ENST00000435622 1283 ntBASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDND2Q8NHS1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 AC068880.1-201ENST00000507289 2297 ntBASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 MIR3917-201ENST00000580971 93 ntBASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 AC141586.3-201ENST00000562166 1838 ntBASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CLDND2Q8NHS1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 BICD1-207ENST00000551848 1962 ntBASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 AL354751.1-201ENST00000412768 1863 ntBASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 AC079602.3-201ENST00000623931 403 ntBASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDND2Q8NHS1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms