Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ECEL1P3-201ENST00000427961 737 ntBASIC17.13■□□□□ 0.33
NUP43Q8NFH3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 SEC1P-202ENST00000473944 940 ntBASIC17.13■□□□□ 0.33
NUP43Q8NFH3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 PHGDH-209ENST00000641074 1780 ntBASIC17.12■□□□□ 0.33
NUP43Q8NFH3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
NUP43Q8NFH3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 AL096828.2-201ENST00000567259 1965 ntBASIC17.11■□□□□ 0.33
NUP43Q8NFH3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 AP000523.1-201ENST00000398242 1049 ntBASIC17.11■□□□□ 0.33
NUP43Q8NFH3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.11■□□□□ 0.33
NUP43Q8NFH3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms