Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 SDHAP2-201ENST00000455183 2001 ntBASIC17.66■□□□□ 0.42
KRT78Q8N1N4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 AC010203.1-204ENST00000548782 407 ntBASIC17.66■□□□□ 0.42
KRT78Q8N1N4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.66■□□□□ 0.42
KRT78Q8N1N4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 COX11P1-201ENST00000489116 835 ntBASIC17.65■□□□□ 0.42
KRT78Q8N1N4 AC034232.1-201ENST00000506026 1064 ntBASIC17.65■□□□□ 0.42
KRT78Q8N1N4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT78Q8N1N4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
KRT78Q8N1N4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.64■□□□□ 0.42
KRT78Q8N1N4 ABALON-201ENST00000629058 1903 ntBASIC17.64■□□□□ 0.42
KRT78Q8N1N4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
KRT78Q8N1N4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
KRT78Q8N1N4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
KRT78Q8N1N4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.64■□□□□ 0.42
KRT78Q8N1N4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
KRT78Q8N1N4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 MIR3917-201ENST00000580971 93 ntBASIC17.64■□□□□ 0.41
KRT78Q8N1N4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms