Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 TOB2P1-201ENST00000469761 992 ntBASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 KRT126P-201ENST00000549467 1181 ntBASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 TPSP2-201ENST00000561760 610 ntBASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 PRELID1P1-202ENST00000567272 903 ntBASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN4BQ8IWT1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN4BQ8IWT1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 DRAXINP1-201ENST00000437611 948 ntBASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 AC008687.5-201ENST00000593746 558 ntBASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 AL592071.1-201ENST00000611956 408 ntBASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms