Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.14
LRRTM1Q86UE6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 KSR1P1-201ENST00000446298 240 ntBASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 AC124016.1-201ENST00000609552 612 ntBASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM1Q86UE6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 AL023284.2-201ENST00000405850 579 ntBASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 AC133681.1-201ENST00000465482 601 ntBASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 AC026366.1-201ENST00000488803 879 ntBASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 AC104771.1-201ENST00000603335 964 ntBASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 KRT18P55-202ENST00000578578 1546 ntBASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM1Q86UE6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 AP002982.1-201ENST00000492365 877 ntBASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 AC130371.2-201ENST00000619443 611 ntBASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
LRRTM1Q86UE6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms