Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PPP4R3CPQ6ZMV5 RBM5-AS1-201ENST00000630404 1386 ntBASIC21.18■□□□□ 0.98
PPP4R3CPQ6ZMV5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PPP4R3CPQ6ZMV5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PPP4R3CPQ6ZMV5 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC21.18■□□□□ 0.98
PPP4R3CPQ6ZMV5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PPP4R3CPQ6ZMV5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
PPP4R3CPQ6ZMV5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PPP4R3CPQ6ZMV5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 ARHGDIB-201ENST00000228945 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 AL390955.1-201ENST00000428694 934 ntBASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 AADACP1-203ENST00000471766 707 ntTSL 3 BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 LDHBP3-201ENST00000514909 822 ntBASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 AC008592.3-201ENST00000514941 418 ntBASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 AC112220.2-201ENST00000605513 533 ntBASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 FAM72A-208ENST00000607379 1139 ntBASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 U6.48-201ENST00000618523 106 ntBASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 AC006249.1-201ENST00000621223 471 ntBASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PPP4R3CPQ6ZMV5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 AP001505.1-201ENST00000569966 824 ntBASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 AC090371.1-201ENST00000580071 558 ntTSL 4 BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 BNIP3P24-201ENST00000593398 557 ntBASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 DNAJC19P3-201ENST00000594491 331 ntBASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PPP4R3CPQ6ZMV5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 KRT8P41-201ENST00000533985 1514 ntBASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 MTND4P34-201ENST00000572715 1371 ntBASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 AC096733.2-201ENST00000609937 1394 ntBASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 AL161938.1-201ENST00000569833 2180 ntBASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 RPF1-202ENST00000370656 724 ntTSL 2 BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 CCL7-201ENST00000378569 810 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 CCL7-202ENST00000394627 696 ntTSL 3 BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 SH3YL1-204ENST00000403658 1279 ntTSL 2 BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 AL513123.1-201ENST00000415883 597 ntTSL 5 BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 FAM207BP-201ENST00000447172 505 ntBASIC21.15■□□□□ 0.98
PPP4R3CPQ6ZMV5 AC097488.1-201ENST00000507834 756 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms