Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA2Q6UWI4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 AC112777.1-201ENST00000540175 1423 ntBASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 AL162377.1-201ENST00000618844 1793 ntBASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 AC112482.1-201ENST00000492080 688 ntBASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA2Q6UWI4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 AL512408.1-201ENST00000569378 2000 ntBASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 AC092910.1-201ENST00000482027 1129 ntBASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 OR7E14P-202ENST00000530490 1290 ntBASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 AC034105.1-201ENST00000563488 319 ntBASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 AC134684.3-201ENST00000641758 218 ntBASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA2Q6UWI4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA2Q6UWI4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
SHISA2Q6UWI4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA2Q6UWI4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA2Q6UWI4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA2Q6UWI4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.15□□□□□ -0.14
SHISA2Q6UWI4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA2Q6UWI4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.15□□□□□ -0.14
SHISA2Q6UWI4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA2Q6UWI4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SHISA2Q6UWI4 Z82202.1-201ENST00000623446 1880 ntBASIC14.15□□□□□ -0.14
SHISA2Q6UWI4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA2Q6UWI4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA2Q6UWI4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA2Q6UWI4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA2Q6UWI4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA2Q6UWI4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.15□□□□□ -0.14
SHISA2Q6UWI4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SHISA2Q6UWI4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA2Q6UWI4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms