Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 NAPSB-206ENST00000562112 1266 ntBASIC20.63■□□□□ 0.89
SHC4Q6S5L8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 AC024243.1-201ENST00000609234 778 ntBASIC20.63■□□□□ 0.89
SHC4Q6S5L8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SHC4Q6S5L8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 AL596275.1-201ENST00000423464 877 ntBASIC20.62■□□□□ 0.89
SHC4Q6S5L8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 AC128688.1-201ENST00000487626 519 ntBASIC20.62■□□□□ 0.89
SHC4Q6S5L8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SHC4Q6S5L8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 AC006116.8-202ENST00000587620 1550 ntBASIC20.61■□□□□ 0.89
SHC4Q6S5L8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.61■□□□□ 0.89
SHC4Q6S5L8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.61■□□□□ 0.89
SHC4Q6S5L8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms