Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 GMCL1P1-201ENST00000463439 1581 ntBASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 TNXA-203ENST00000507684 2038 ntBASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 LINC00167-201ENST00000530583 1419 ntBASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 TSPY12P-201ENST00000421279 868 ntBASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 AC091607.1-201ENST00000490318 1060 ntBASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 AC074051.2-201ENST00000565115 352 ntBASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 AL121894.2-201ENST00000602977 491 ntBASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.31■□□□□ 0.84
SWSAP1Q6NVH7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 AL845331.1-201ENST00000424978 1190 ntBASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 AC104819.1-201ENST00000504587 486 ntBASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 AC011840.4-201ENST00000578471 627 ntBASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 Z69720.1-201ENST00000601483 472 ntBASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 ESPNP-201ENST00000270691 2015 ntBASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SWSAP1Q6NVH7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 KRT17P6-201ENST00000453795 1220 ntBASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 FOSL1P1-201ENST00000511041 816 ntBASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 AP005901.3-202ENST00000581653 237 ntBASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 AC073592.3-201ENST00000625118 1834 ntBASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 WIZP1-201ENST00000531444 2299 ntBASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms