Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PPP4R4Q6NUP7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
PPP4R4Q6NUP7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 RPS2P55-201ENST00000397318 883 ntBASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 AC107956.1-201ENST00000494359 873 ntBASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 AP001412.1-201ENST00000608405 714 ntBASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 KRT8P8-201ENST00000434750 1448 ntBASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP4R4Q6NUP7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 RARRES2P10-201ENST00000564312 460 ntBASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP4R4Q6NUP7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms