Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.19■□□□□ 0.98
KRT40Q6A162 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KRT40Q6A162 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.19■□□□□ 0.98
KRT40Q6A162 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT40Q6A162 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT40Q6A162 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT40Q6A162 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT40Q6A162 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT40Q6A162 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.19■□□□□ 0.98
KRT40Q6A162 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT40Q6A162 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KRT40Q6A162 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT40Q6A162 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
KRT40Q6A162 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRT40Q6A162 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.18■□□□□ 0.98
KRT40Q6A162 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT40Q6A162 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT40Q6A162 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.18■□□□□ 0.98
KRT40Q6A162 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.18■□□□□ 0.98
KRT40Q6A162 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT40Q6A162 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT40Q6A162 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRT40Q6A162 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.18■□□□□ 0.98
KRT40Q6A162 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRT40Q6A162 AL450487.1-201ENST00000426799 995 ntBASIC21.18■□□□□ 0.98
KRT40Q6A162 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.18■□□□□ 0.98
KRT40Q6A162 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.18■□□□□ 0.98
KRT40Q6A162 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.18■□□□□ 0.98
KRT40Q6A162 NEK4P2-201ENST00000580004 1012 ntBASIC21.18■□□□□ 0.98
KRT40Q6A162 AL138966.2-201ENST00000621997 464 ntBASIC21.18■□□□□ 0.98
KRT40Q6A162 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
KRT40Q6A162 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
KRT40Q6A162 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRT40Q6A162 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.18■□□□□ 0.98
KRT40Q6A162 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT40Q6A162 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRT40Q6A162 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRT40Q6A162 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT40Q6A162 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.18■□□□□ 0.98
KRT40Q6A162 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT40Q6A162 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
KRT40Q6A162 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.17■□□□□ 0.98
KRT40Q6A162 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KRT40Q6A162 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.17■□□□□ 0.98
KRT40Q6A162 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT40Q6A162 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KRT40Q6A162 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT40Q6A162 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
KRT40Q6A162 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.17■□□□□ 0.98
KRT40Q6A162 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KRT40Q6A162 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.17■□□□□ 0.98
KRT40Q6A162 MIR3180-4-201ENST00000582223 153 ntBASIC21.17■□□□□ 0.98
KRT40Q6A162 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.17■□□□□ 0.98
KRT40Q6A162 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT40Q6A162 AC141257.4-201ENST00000634557 245 ntBASIC21.17■□□□□ 0.98
KRT40Q6A162 AC136944.6-201ENST00000634818 245 ntBASIC21.17■□□□□ 0.98
KRT40Q6A162 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.17■□□□□ 0.98
KRT40Q6A162 PHGDH-209ENST00000641074 1780 ntBASIC21.17■□□□□ 0.98
KRT40Q6A162 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
KRT40Q6A162 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KRT40Q6A162 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT40Q6A162 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.17■□□□□ 0.98
KRT40Q6A162 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
KRT40Q6A162 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT40Q6A162 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
KRT40Q6A162 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT40Q6A162 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT40Q6A162 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT40Q6A162 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT40Q6A162 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT40Q6A162 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.16■□□□□ 0.98
KRT40Q6A162 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
KRT40Q6A162 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KRT40Q6A162 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT40Q6A162 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT40Q6A162 RNF152P1-201ENST00000397754 604 ntBASIC21.16■□□□□ 0.98
KRT40Q6A162 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
KRT40Q6A162 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.16■□□□□ 0.98
KRT40Q6A162 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT40Q6A162 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT40Q6A162 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT40Q6A162 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.16■□□□□ 0.98
KRT40Q6A162 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KRT40Q6A162 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.16■□□□□ 0.98
KRT40Q6A162 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
KRT40Q6A162 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KRT40Q6A162 REXO1L9P-201ENST00000604264 2108 ntBASIC21.16■□□□□ 0.98
KRT40Q6A162 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT40Q6A162 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT40Q6A162 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRT40Q6A162 LINC01126-201ENST00000623515 1646 ntBASIC21.15■□□□□ 0.98
KRT40Q6A162 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRT40Q6A162 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT40Q6A162 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT40Q6A162 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT40Q6A162 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
KRT40Q6A162 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
KRT40Q6A162 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT40Q6A162 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT40Q6A162 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms