Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20■□□□□ 0.79
CDKAL1Q5VV42 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKAL1Q5VV42 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CDKAL1Q5VV42 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20■□□□□ 0.79
CDKAL1Q5VV42 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDKAL1Q5VV42 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKAL1Q5VV42 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDKAL1Q5VV42 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDKAL1Q5VV42 MME-217ENST00000616757 1315 ntTSL 5 BASIC20■□□□□ 0.79
CDKAL1Q5VV42 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 AC112497.1-201ENST00000624824 639 ntBASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKAL1Q5VV42 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 AC132938.6-201ENST00000623828 1655 ntBASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 AC007663.1-201ENST00000438948 1240 ntBASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CDKAL1Q5VV42 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 UNC93B2-201ENST00000285383 730 ntBASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 DUTP2-201ENST00000519164 463 ntBASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 BX088651.1-201ENST00000540551 451 ntBASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 FITM1-202ENST00000559294 800 ntBASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 AC009065.1-201ENST00000564055 1225 ntBASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 FZD10-202ENST00000539839 3282 ntBASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CDKAL1Q5VV42 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms