Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CDC42BPAQ5VT25 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC27.57■■■□□ 2
CDC42BPAQ5VT25 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC27.57■■■□□ 2
CDC42BPAQ5VT25 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC27.57■■■□□ 2
CDC42BPAQ5VT25 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC27.56■■■□□ 2
CDC42BPAQ5VT25 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CDC42BPAQ5VT25 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CDC42BPAQ5VT25 RPSAP43-201ENST00000402237 625 ntBASIC27.56■■■□□ 2
CDC42BPAQ5VT25 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC27.56■■■□□ 2
CDC42BPAQ5VT25 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
CDC42BPAQ5VT25 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CDC42BPAQ5VT25 AC010460.3-201ENST00000511359 1579 ntBASIC27.56■■■□□ 2
CDC42BPAQ5VT25 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CDC42BPAQ5VT25 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC27.56■■■□□ 2
CDC42BPAQ5VT25 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
CDC42BPAQ5VT25 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
CDC42BPAQ5VT25 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CDC42BPAQ5VT25 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
CDC42BPAQ5VT25 AC005332.7-201ENST00000614046 2005 ntBASIC27.56■■■□□ 2
CDC42BPAQ5VT25 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC27.55■■■□□ 2
CDC42BPAQ5VT25 GPX1P2-201ENST00000429271 606 ntBASIC27.55■■■□□ 2
CDC42BPAQ5VT25 HS6ST1P1-201ENST00000481504 1234 ntBASIC27.55■■■□□ 2
CDC42BPAQ5VT25 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
CDC42BPAQ5VT25 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC27.55■■■□□ 2
CDC42BPAQ5VT25 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
CDC42BPAQ5VT25 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC27.55■■■□□ 2
CDC42BPAQ5VT25 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC27.55■■■□□ 2
CDC42BPAQ5VT25 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC27.55■■■□□ 2
CDC42BPAQ5VT25 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC27.55■■■□□ 2
CDC42BPAQ5VT25 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC27.55■■■□□ 2
CDC42BPAQ5VT25 UPF3AP3-201ENST00000420996 769 ntBASIC27.55■■■□□ 2
CDC42BPAQ5VT25 AC005104.2-201ENST00000427818 678 ntBASIC27.55■■■□□ 2
CDC42BPAQ5VT25 HMGN1P19-201ENST00000436976 333 ntBASIC27.55■■■□□ 2
CDC42BPAQ5VT25 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC27.55■■■□□ 2
CDC42BPAQ5VT25 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC27.55■■■□□ 2
CDC42BPAQ5VT25 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CDC42BPAQ5VT25 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
CDC42BPAQ5VT25 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC27.55■■■□□ 2
CDC42BPAQ5VT25 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
CDC42BPAQ5VT25 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CDC42BPAQ5VT25 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC27.55■■■□□ 2
CDC42BPAQ5VT25 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC27.55■■■□□ 2
CDC42BPAQ5VT25 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CDC42BPAQ5VT25 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC27.54■■■□□ 2
CDC42BPAQ5VT25 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CDC42BPAQ5VT25 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC27.54■■■□□ 2
CDC42BPAQ5VT25 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC27.54■■■□□ 2
CDC42BPAQ5VT25 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC27.54■■■□□ 2
CDC42BPAQ5VT25 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CDC42BPAQ5VT25 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC27.54■■■□□ 2
CDC42BPAQ5VT25 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC27.54■■■□□ 2
CDC42BPAQ5VT25 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC27.54■■■□□ 2
CDC42BPAQ5VT25 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CDC42BPAQ5VT25 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC27.53■■■□□ 2
CDC42BPAQ5VT25 NKAPP1-205ENST00000585790 367 ntBASIC27.53■■■□□ 2
CDC42BPAQ5VT25 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC27.53■■■□□ 2
CDC42BPAQ5VT25 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
CDC42BPAQ5VT25 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
CDC42BPAQ5VT25 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
CDC42BPAQ5VT25 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CDC42BPAQ5VT25 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
CDC42BPAQ5VT25 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
CDC42BPAQ5VT25 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC27.53■■■□□ 2
CDC42BPAQ5VT25 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
CDC42BPAQ5VT25 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CDC42BPAQ5VT25 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CDC42BPAQ5VT25 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CDC42BPAQ5VT25 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CDC42BPAQ5VT25 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC27.53■■■□□ 2
CDC42BPAQ5VT25 CENPM-204ENST00000402420 688 ntTSL 5 BASIC27.53■■■□□ 2
CDC42BPAQ5VT25 LAGE3P1-201ENST00000425356 484 ntBASIC27.53■■■□□ 2
CDC42BPAQ5VT25 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC27.53■■■□□ 2
CDC42BPAQ5VT25 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC27.53■■■□□ 2
CDC42BPAQ5VT25 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC27.53■■■□□ 2
CDC42BPAQ5VT25 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CDC42BPAQ5VT25 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
CDC42BPAQ5VT25 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC27.52■■■□□ 2
CDC42BPAQ5VT25 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC27.52■■■□□ 2
CDC42BPAQ5VT25 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC27.52■■■□□ 2
CDC42BPAQ5VT25 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC27.52■■■□□ 2
CDC42BPAQ5VT25 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CDC42BPAQ5VT25 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC27.52■■■□□ 2
CDC42BPAQ5VT25 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC27.52■■■□□ 2
CDC42BPAQ5VT25 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CDC42BPAQ5VT25 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC27.52■■■□□ 2
CDC42BPAQ5VT25 ETFA-208ENST00000559602 792 ntTSL 3 BASIC27.52■■■□□ 2
CDC42BPAQ5VT25 COX5A-204ENST00000567270 579 ntTSL 3 BASIC27.52■■■□□ 2
CDC42BPAQ5VT25 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC27.52■■■□□ 2
CDC42BPAQ5VT25 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC27.51■■□□□ 1.99
CDC42BPAQ5VT25 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC27.51■■□□□ 1.99
CDC42BPAQ5VT25 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
CDC42BPAQ5VT25 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CDC42BPAQ5VT25 MIR940-201ENST00000401276 94 ntBASIC27.51■■□□□ 1.99
CDC42BPAQ5VT25 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC27.51■■□□□ 1.99
CDC42BPAQ5VT25 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC27.51■■□□□ 1.99
CDC42BPAQ5VT25 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC27.51■■□□□ 1.99
CDC42BPAQ5VT25 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.51■■□□□ 1.99
CDC42BPAQ5VT25 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC27.51■■□□□ 1.99
CDC42BPAQ5VT25 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC27.51■■□□□ 1.99
CDC42BPAQ5VT25 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC27.51■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms